Batch-Training output

The batch_seqstructhmm script writes all its output into the given batch directory (set with the batch_directory parameter). There, it creates a batch job directory with the name batch_<date>_<time>. In the batch job directory, batch.log holds the standard output of the script. Additionally, it contains one directory for each protein in the batch: <protein>_<struct. type>_ml<motif len.>_fl<flex.>_bs<block size>_ti<term. interval>_tt<threshold>

These directories have the same structure as other training output directories. See Training output for details.