InstallationΒΆ
We distribute ssHMM both as a Python package and as a Docker image (similar to a virtual machine). There are three ways to install ssHMM:
- quick and easy installation
- requires Conda
- recommended for most users
- quick and easy installation
- requires Docker
- requires sudo rights
- all dependencies of ssHMM are pre-installed in the image
- recommended for Linux beginners
- more difficult installation
- dependencies of ssHMM have to be installed manually
- recommended only for experienced users